Publications

Highlighted publications

  • Bogaert KA, Zakka EE, Coelho SM, De Clerck O (2022) Polarization of brown algal zygotes. Semin Cell Dev Biol. doi: 10.1016/j.semcdb.2022.03.008 [IF(2020): 7.727, Q1: Rank: 4/41] [link]
  • Bogaert KA, Blomme J, Beeckman T, De Clerck O. (2021) Auxin’s origin: do PILS hold the key? Trends in Plant Science 27: 227-236. [link] [IF5(2020): 20.034, Q1: Rank: 2/235]
  • Iha C, Dougan KE, Varela JA, Avila V, Jackson CJ, Bogaert KA, Chen Y, Judd LM, Wick R, Holt KE, Pasella MM, Ricci F, Repetti SI, Medina M, Marcelino VR, Chan CX, Verbruggen H. (2021) Genomic adaptations to an endolithic lifestyle in the coral-associated alga Ostreobium. Current Biology, 31(7): 1393-1402.e5. [link] [IF5(2020): 11.713, Q1: Rank: 26/295]
  • Bogaert KA, Perez E, Rumin J, Giltay A, Carone M, Coosemans N, Radoux M, Eppe G, Levine RD, Remacle F, Remacle C. (2019) Metabolic, physiological, and transcriptomics analysis of batch cultures of the green microalga Chlamydomonas grown on different acetate concentrations. Cells 8: 1367 [link] [IF: 5.565; Q1; Rank: 40/193]
  • Bogaert KA, Blommaert L,Ljung K, Beeckman T, De Clerck O. (2019) Auxin function in the brown alga Dictyota dichotoma. Plant Physiology 179: 280-299 [Link] [IF5: 6.62; Q1; Rank: 11/223]
  • De Clerck O, Kao S-M, Bogaert KA, Blomme J, Foflonker F, Kwantes M, Vancaester E, Vanderstraeten L, Aydogdu E, Boesger J, et al (2018) Insights into the evolution of multicellularity from the sea lettuce genome. Current Biology 28,  2921-2933 [Link] [IF5: 9.97; Q1; Rank: 17/293]
  • Del Cortona A, Leliaert F, Bogaert KA, Turmel M, Boedeker C, Janouskovec J, Lopez-Bautista JM, Verbruggen H, Vandepoele K, De Clerck O (2017) The plastid genome in Cladophorales green algae is encoded by hairpin chromosomes. Current Biology 27: 3771-3782 [Link] [IF5: 9.97; Q1; Rank: 17/293]
  • Bogaert KA, Beeckman T, De Clerck O (2017) Two-step cell polarization in algal zygotes. Nature Plants 3: 16221 [Link] [Free access: SharedIt] [Knack Magazine] [Blog The Node] [IF5 : 11.47; Q1; Rank: 3/223]

Full publication list

  • Bogaert KA, Zakka EE, Coelho SM, Clerck O De (2022) Polarization of brown algal zygotes. Semin Cell Dev Biol. doi: 10.1016/j.semcdb.2022.03.008
  • Liu X, Blomme J, Bogaert KA, D’hondt S, Wichard T, Deforce D, Van Nieuwerburgh F & De Clerck, O. (2022). Transcriptional dynamics of gametogenesis in the green seaweed Ulva mutabilis identifies an RWP-RK transcription factor linked to reproduction. BMC plant biology, 22, 1-12.
  • Bogaert KA, Blomme J, Beeckman T, De Clerck O. (2021) Auxin’s origin: do PILS hold the key? Trends in Plant Science 27: 227-236. [link]
  • Iha C, Dougan KE, Varela JA, Avila V, Jackson CJ, Bogaert KA, Chen Y, Judd LM, Wick R, Holt KE, Pasella MM, Ricci F, Repetti SI, Medina M, Marcelino VR, Chan CX, Verbruggen H. (2021) Genomic adaptations to an endolithic lifestyle in the coral-associated alga Ostreobium. Current Biology, 31(7): 1393-1402.e5. [link]
  • Bogaert KA, Delva S, De Clerck O. (2020) Concise review of the genus Dictyota JV Lamouroux. Journal of Applied Phycology https://doi.org/10.1007/s10811-020-02121-4 [link]
  • Bogaert KA, Perez E, Rumin J, Giltay A, Carone M, Coosemans N, Radoux M, Eppe G, Levine RD, Remacle F, Remacle C. (2019) Metabolic, physiological, and transcriptomics analysis of batch cultures of the green microalga Chlamydomonas grown on different acetate concentrations. Cells 8: 1367 [link]
  • Bogaert KA, Blommaert L, Ljung K, Beeckman T, De Clerck O. (2019) Auxin function in the brown alga Dictyota dichotoma. Plant Physiology 179: 280-299 [link]
  • Willamme RA, Bogaert KA, Remacle F, Remacle C. (2018) RNA-seq data and surprisal analysis of icl mutant and control strain of the green microalga Chlamydomonas reinhardtii during day/night cycles. Data in Brief. 2018 21: 351–353.
  • De Clerck O, Kao S-M, Bogaert KA, Blomme J, Foflonker F, Kwantes M, Vancaester E, Vanderstraeten L, Aydogdu E, Boesger J, et al (2018) Insights into the evolution of multicellularity from the sea lettuce genome. Current Biology 28,  2921-2933 [link]
  • Willamme R, Bogaert KA, Remacle F, Remacle C (2018) Surprisal analysis of the transcriptomic response of the green microalga Chlamydomonas to the addition of acetate during day/night cycles. Chemical Physics 514, 154-163 [link]
  • Bogaert KA, Manoharan-basil SS, Perez E, Levine RD, Remacle F, Remacle C (2018) Surprisal analysis of genome-wide transcript profiling identifies differentially expressed genes and pathways associated with four growth conditions in the microalga Chlamydomonas. PLoS One 13: e0195142 [link]
  • Del Cortona A, Leliaert F, Bogaert KA, Turmel M, Boedeker C, Janouskovec J, Lopez-Bautista JM, Verbruggen H, Vandepoele K, De Clerck O (2017) The plastid genome in Cladophorales green algae is encoded by hairpin chromosomes. Current Biology 27: 3771-3782 [link]
  • Liu X, Bogaert KA, Engelen AH, Leliaert F, Roleda MY, De Clerck O (2017) Seaweed reproductive biology: environmental and genetic controls. Botanica Marina 60: 89-108. [link]
  • Bogaert KA, Beeckman T, De Clerck O. (2017) Egg activation-triggered shape change in the Dictyota dichotoma (Phaeophyceae) zygote is actin–myosin and secretion dependent. Annals of Botany 120: 529–538 [link] [Blog: Botany One]
  • Bogaert KA, Beeckman T, De Clerck O (2017) Two-step cell polarization in algal zygotes. Nature Plants. 3: 16221. doi:10.1038/nplants.2016.221 [link] [Free access: SharedIt] [Knack Magazine] [Blog The Node]
  • Bogaert KA, Beeckman T, De Clerck O (2016) Abiotic regulation of growth and fertility in the sporophyte of Dictyota dichotoma (Hudson) J.V. Lamouroux (Dictyotales, Phaeophyceae). Journal of Applied Phycology 28:  2915-2924. [link]
  • Bogaert KA, Beeckman T, De Clerck O (2015) Photopolarization of Fucus zygotes is determined by time sensitive vectorial addition of environmental cues during axis amplification. Frontiers in Plant Science 6:26. [link]
  • Bogaert KA, Arun A, Coelho SM, De Clerck O (2013) Brown algae as model for plant organogenesis. In Methods in Molecular Biology: Plant Organogenesis (De Smet I ed). Humana Press. Totowa, NJ, 959: 97-125. [link]
  • De Clerck O, Bogaert KA & Leliaert F (2012) Diversity and evolution of algae: Primary endosymbiosis. Advances in Botanical Research 64: 55-86.